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[MICCAI 2025] This is the official code for the paper "Lightweight Data-Free Denoising for Detail-Preserving Biomedical Image Restoration"

Jupyter Notebook 22 5 Updated Nov 28, 2025

A library for converting EHR data into LLM ingestible text.

Python 13 3 Updated Mar 20, 2026

PyTorch implementation of SPOCO

Python 33 7 Updated Aug 3, 2024
Python 16 1 Updated Jan 16, 2024
Python 136 22 Updated Oct 7, 2025

BITES: Balanced Individual Treatment Effect for Survival data

Python 19 3 Updated Jul 24, 2023

Survival analysis with PyTorch

Python 967 207 Updated Sep 4, 2024

A grid sampler for larger-than-memory N-dimensional images

Python 28 2 Updated Nov 11, 2025

SurvITE: Learning Heterogeneous Treatment Effects from Time-to-Event Data

Python 20 7 Updated Oct 25, 2021

Segment anything with our Napari integration of Meta AI's Segment Anything Model (SAM)!

Python 246 33 Updated Mar 4, 2024

Survival analysis in Python

Python 2,565 568 Updated Mar 7, 2026
Python 8,218 2,336 Updated Mar 26, 2026

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on d…

Python 1,350 293 Updated Jun 17, 2024

Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios wit…

Python 257 64 Updated Mar 31, 2026

A framework for data augmentation for 2D and 3D image classification and segmentation

Jupyter Notebook 1,171 229 Updated Mar 25, 2025

KErnel OPerationS, on CPUs and GPUs, with autodiff and without memory overflows

Python 1,164 76 Updated Mar 19, 2026

A visualization library for PyTorch tensors

Python 19 1 Updated Apr 16, 2023

Research code need not be ugly.

Python 77 5 Updated Sep 13, 2023