-
Fred Hutch Data Science Lab/Office of the Chief Data Officer
- Oregon
- https://scottchamberlain.info
- https://orcid.org/0000-0003-1444-9135
- @sckottie@hachyderm.io
- @sckott.bsky.social
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Starred repositories
🚀 The Architecture of Open Source Applications Volume 1 & 2, 500 Lines or Less, Software Design by Example, Performance of Open Source Applications (PDF)
Fyn is a fork of uv for fast Python package management, dependency resolution, virtual environments, and pyproject.toml workflows.
Reusable database fixtures for any and all databases.
Alternative R Frontend — a modern R console written in Rust
A 5-20x faster experimental Homebrew alternative
Litestar Fullstack Reference Application with React, Vite, SQLAlchemy, Docker, Task Queues, and more!
A Git-compatible VCS that is both simple and powerful
A performant Kubernetes-based task executor for the Task Execution Service (TES) specification.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Build and publish crates with pyo3, cffi and uniffi bindings as well as rust binaries as python packages
Lightweight, robust, elegant syntax highlighting.
The first web framework designed for AI to write. Built on Python, FastAPI, Pydantic, and HTMX. By the authors of Two Scoops of Django.
Simulate ARGs and genomic sequence data using population genetic models
A cross-platform, OpenGL terminal emulator.
A Morloc language extension for the Zed editor
A fast asyncio MySQL/MariaDB driver with replication protocol support
Warp is the agentic development environment, built for coding with multiple AI agents.
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
Configure workflow/pipeline tests using yaml files.
Requests For Comments for the St. Jude Rust Labs project
✨ HTML Template Linter and Formatter. Django - Jinja - Nunjucks - Handlebars - GoLang
A fast static site generator in a single binary with everything built-in. https://www.getzola.org