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Starred repositories
CommonMark parsing and rendering library and program in C
Hundreds of models & providers. One command to find what runs on your hardware.
Jupyter extensions that help you write code faster: Context aware AI Chat, Autocomplete, and Spreadsheet
Interactive TUI for bulk managing dependency PRs. Multi-repo support, keyboard navigation, live settings. A better Dependabot/Renovate workflow.
MPBoot: Fast phylogenetic maximum parsimony tree inference and bootstrap approximation
Powerful system-level package manager for Linux, macOS and Windows written in Rust – building on top of the Conda ecosystem.
Protobuf and gRPC specifications for the MinKNOW API
🍮 Minimalistic API for writing text-based user interfaces in pure Crystal
LangArena: A Balanced Programming Language Benchmark Suite
Read Until client library for Nanopore Sequencing
ChromoPattern is a framework designed to characterize four copy number alteration (CNA) patterns at the single-cell level. It identifies CNA patterns associated with **de novo** CNA accumulation an…
A package to run real time analysis of nanopore methylation data.
Raw nanopore signal mapper that enables real-time targeted sequencing
Fast and scalable nanopore adaptive sampling
uBlock Origin - An efficient blocker for Chromium and Firefox. Fast and lean.
List of useful Quick Look plugins for developers
SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA replication, and DNA transcription on the activities of differ…
Assignment of known mutational signatures to individual samples and individual somatic mutations