Beginner, advanced, expert level Rust training material

Agent Skills for Mojo and MAX development

🛠️🧬 A Software Framework to Manipulate Assembly Graphs

AI-assisted academic posters.

A small program to showcase what a «graph» typically refers to in computer science. It's also capable of finding the shortest path between two points.

Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)

📖 🧬 SSHash is a compressed, associative, exact, and weighted dictionary for k-mers.

AI agents running research on single-GPU nanochat training automatically

Pangenome explorations

VSCode theme based off the easemate IDE and Jetbrains islands theme

A scientific plotting library in Rust

A shortest-path index for bidirected graphs based on the SPQR decomposition.

Shortest paths in biological overlap graphs with or without indexing.

A Python package to quickly decompose weighted graphs (acyclic or not) into weighted paths or walks, under various models.

Create beautiful slides on the web using Claude's frontend skills

A macOS app for exporting iMessage conversations to Markdown files

Hybrid somatic SV caller using long reads and short-read refinement for tumor–normal sequencing.

MAS-Iso-Seq Isoform Identification and Quantification

A toolkit for exploring regions of variation in pangenomes

Fast and Optimal Affine-Gap Sequence-to-Graph Alignment

The official repository for the ARSENAL model

Lists of company wise questions. Every csv file in the companies directory corresponds to a list of questions on leetcode for a specific company based on the leetcode company tags. Updated as of 20…

Genome Copilot: AI-Interactive Genomic Visualization + Variant Risk Screening

Open source implementation and extension of Google Research’s PaperBanana for automated academic figures, diagrams, and research visuals, expanded to new domains like slide generation.

Sketches with exact kmers representation